Dcode.org: Tools Developed by the Research Group of Ivan Ovcharenko at the National Library of Medicine

 Dcode.org   ECR Browser   ECRBase   Mulan   zPicture   DiRE   SynoR   rVista 2.0   multiTF   eShadow   CAPE   SNPDelScore 
 
multiTF :: http:// multitf . dcode . org

multiTF identifies transcription factor binding sites conserved across multiple species


There are 3 diffrent ways to initiate a multiTF search:

Mulan (mulan.dcode.org) multiple sequence alignments of FINISHED sequences can be automatically submitted to multiTF from the results web page.

GALA (Genome Alignment and Annotation Database; http://gala.cse.psu.edu/) automatically forwards genome alignment data to Mulan for the subsequent multiTF post-processing.

ECR Browser (ecrbrowser.dcode.org) multi-genome sequence data can be automatically forwarded to Mulan and then to multiTF by using the "Synteny/Alignments" feature of the tool.



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